Information Theory, Evolution, and The Origin of Life by Hubert P. Yockey

By Hubert P. Yockey

Details conception, Evolution and the foundation of lifestyles provides a well timed advent to using info thought and coding concept in molecular biology. The genetical info process, since it is linear and electronic, resembles the algorithmic language of pcs. George Gamow mentioned that the appliance of Shannon's details conception breaks genetics and molecular biology out of the descriptive mode into the quantitative mode and Dr Yockey develops this topic, discussing how info thought and coding idea may be utilized to molecular biology. He discusses how those instruments for measuring the data within the sequences of the genome and the proteome are crucial for our entire figuring out of the character and foundation of lifestyles. the writer writes for the pc efficient reader who's attracted to evolution and the origins of existence.

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Because I (A; B) has a finite maximum value, it is reasonable, in the case of a communication channel, to call that maximum the channel capacity. According to Shannon’s Channel Capacity Theorem, there is no code that can be used to transmit information at a rate greater than the channel capacity. This is intuitively reasonable, as sequences in alphabet B cannot be more similar to sequences in alphabet A than identity. We are, in fact, not limited in this interpretation of mutual entropy and Shannon’s Channel Capacity Theorem.

Ideally, the sequences generated by the source in alphabet A will be those recorded in alphabet B at the receiver. In the real case there is always a second random Markov process that acts on the original message so that a letter in the original message may cross over to another letter at the receiver. This has been called missense, and that like the terms nonsense and degeneracy, is an unjustifiably pejorative survivor of the days when the genetic code was not understood. In Chapter 6, I discuss the fact that many sites in a protein sequence may be occupied by a number of functionally equivalent amino acids.

Such a sequence forms a message in which some gamblers find meaning or knowledge by which they make their bets. By contrast, information theory is concerned with messages expressed in sequences of letters selected from a finite alphabet. The letters of the alphabet construct the sample space under consideration as random variables and the pi are defined accordingly. 4 The question of negentropy: Can entropy be negative? The great mathematician Norbert Wiener (1894–1964) regarded negative entropy as a measure of information (Wiener 1948).

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